PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G16810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WOX
Protein Properties Length: 333aa    MW: 33657.3 Da    PI: 6.3872
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G16810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.85.9e-064076237
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC CS
         Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl 37
                     r+R+t+++eq+ +Le+ F+    +p  +e  ++ k+l
  ONIVA03G16810.1 40 RSRWTPKPEQILILESIFNTgMVNPPNDETPRIRKQL 76
                     89*****************989***999999999998 PP
2Wus_type_Homeobox68.71.1e-223999264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +r+RWtP+peQi iLe+++++G+++P+++e+ ri+++L++yG+  ++N    +QN+  R+r +
    ONIVA03G16810.1 39 VRSRWTPKPEQILILESIFNTGMVNPPNDETPRIRKQLQKYGADANAN--DCYQNHNPRSRPR 99
                       589***************************************855555..5567776666644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEGSSNSPDR QSSGGSPPEE RGGGGSGGGG GRSAAGEPVR SRWTPKPEQI LILESIFNTG  60
MVNPPNDETP RIRKQLQKYG ADANANDCYQ NHNPRSRPRH RQSQTHAAAA AAAASSSSPS  120
ANTSPAAASA ATVQVGLPPV AVVHTMAMGG SACQYEQQAS SSSSSGSTGG SSLGLFAHGA  180
GASGAGGYLQ ASCGASASAS SALAPGLMGD VVDSGGSDDL FAISRQMGFV GSPRCSPASS  240
PATPSSAATA AQQQFYSCQL PAATITVFIN GVPMEMPRGP IDLRAMFGQD VMLVHSTGAL  300
LPVNDYGILM QSLQIGESYF LMHEPAGVQL VLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12132RGGGGSGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17810.15e-21WOX family protein