PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA03G15770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 109aa MW: 12610.3 Da PI: 10.1863 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.4 | 1.4e-12 | 33 | 78 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +WT+eEd l ++ + G+++W+++a+ m+ +R++ qc++rw+++l ONIVA03G15770.1 33 AWTPEEDAVL-RLAMENGSRHWRRVAAQMPrRRRSPAQCRDRWRDHL 78 7*****9877.5667899999***********************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 109 aa Download sequence |
MDMELSSSST TVASSPASPL LGRCVVRIRL PPAWTPEEDA VLRLAMENGS RHWRRVAAQM 60 PRRRRSPAQC RDRWRDHLAR DVFHRHFTSA DDTELARLCL HLDDAGHRW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G67300.1 | 3e-07 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA03G15770.1 |