PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G12660.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 26100 Da PI: 5.3077 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.4 | 7.2e-18 | 49 | 98 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr ++ +g+Wv+eIr p + +r++lg++ t+e Aa+a++aa ++l+g ONIVA03G12660.1 49 PYKGVRMRS-WGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 98 59****998.**********7.....335************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MVKNTSNKCI AAAGATAAAG LGGGAASCSG GGGDGKVTTA AAAALAVRPY KGVRMRSWGS 60 WVSEIRAPHQ KRRIWLGSYA TPEAAARAYD AALLCLKGSD AILNFPSSAS SRRRLDIHRG 120 STDSAAGDMS PRSIQRVAAA AAAAFDAAAA GVVVDESCSC SAEAMSSTPT SGATSLSTLG 180 SSGGGDVLDH ATTPSSSSSA AANVCSPPLE GDHELWTELD AFASPKFMDL MAAGGTAFSS 240 PWEEPEEDGE LMRLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G12660.1 |