PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G12480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 84aa MW: 9185.21 Da PI: 8.5165 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.9 | 1.7e-15 | 29 | 79 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +g++ AeI++ ++++ +lg f+taeeA + +++a+++l+g+ ONIVA03G12480.1 29 KFRGVRKRP-WGKYGAEIHV----SqQSAHMWLGMFDTAEEATRVYDHAALRLRGP 79 89*******.**********....3245**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence |
MCRSGEEEDG SGGGRGGFGT SVDVAPERKF RGVRKRPWGK YGAEIHVSQQ SAHMWLGMFD 60 TAEEATRVYD HAALRLRGPS GMTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53290.1 | 1e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G12480.1 |