PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G06110.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 340aa    MW: 36402.9 Da    PI: 4.2926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G06110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-17103152255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp+    +  r++lg+f  ae Aa a++ a+++++g
  ONIVA03G06110.1 103 QYRGVRRRP-WGKWAAEIRDPV----KgIRVWLGTFTNAEAAALAYDDAARAIRG 152
                      69*******.**********75....44***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MCGGAILAEL IPSAPAARRV TAGHVWPGDA NNAKKKGARA DDFEAAFRDF DNDSDDEEMM  60
LEEAEEEEAT SEHKPFVFRA KKARKAAAAA AAAASSRRRK PAQYRGVRRR PWGKWAAEIR  120
DPVKGIRVWL GTFTNAEAAA LAYDDAARAI RGDRAKLNFP SATTPDTRKR GRATAAAAPA  180
VKATPVINLV EEEDEEEEVA AAMASIKYEP ETSESSESNA LPDFSWQGMS ASDEFAVAAA  240
ALSLDSDDDL AKKRPRTEPE DTTTTTDSGS GDDTDALFDA LLFADQYNYF NGGAYESLDS  300
LFSADAVQTT AAAAAADQGM GLWSFDDGCC LVDVEASLSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198110RRKPAQYRGVRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.11e-16ERF family protein