PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G06080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 334aa MW: 35889.7 Da PI: 6.0764 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.4e-19 | 110 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdp + +r++lg+f t+eeAa+a++ +++l+g ONIVA03G06080.1 110 HFRGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFNTPEEAARAYDVEARRLRG 159 69*******.**********72....35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MCGGAILAEF IPAPSRAAAA TKRVTASHLW PAGSKNAARG KSKSKRQQRS FADVDDFEAA 60 FEQFDDDSDF DDAEEEDEGH FVFASKSRVV AGHDWRAAAR AASKKKRGRH FRGIRQRPWG 120 KWAAEIRDPH KGTRVWLGTF NTPEEAARAY DVEARRLRGS KAKVNFPATP AAARPRRGNT 180 RATAVPPPAT APAAAPPRGL KREFSPPAET ALPFFTNGFV DLTTAAAPPP AMMMTSSFTD 240 SVATSESGGS PAKKARSDDV DSSEGSVGGG SDTLGFTDEL EFDPFMLFQL PYSDGYESID 300 SLFAAGDANS ANTDMNAGVN LWSFDDFPID GALF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 2e-27 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G06080.1 |