PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G06070.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 326aa    MW: 35821 Da    PI: 6.1932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G06070.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-18120170155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GVr+++ +gr++AeIrdp++    +r++lg++g+aeeAa a+++ +++++g
  ONIVA03G06070.2 120 SKYRGVRRRP-SGRFAAEIRDPKK---GRRVWLGTYGSAEEAAVAYDREARRIRG 170
                      89********.7*********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MCGGAILADF TPARVPRRLT AAELLPVTPT PPAAERRTTR KRKSDVDFEA EFELFEDDDD  60
DDEFELSDDG DESLAVSCVS SPKSKAVPSF SFSSDVSSSS RPRRRVAAAA AGRRKASKKS  120
KYRGVRRRPS GRFAAEIRDP KKGRRVWLGT YGSAEEAAVA YDREARRIRG KGARLNFPRD  180
GDGSPRRSND RPCWTIDLNL PAAAVSGDDD DAMAVDAADA DAGSAGRAAA YADQEALSAA  240
KCKIKQCPRD EQMASATPEL MEEDASSSRN MVPLSMALQL QYAAMIAECD REMEEIAAVE  300
RDLERRRRQV FERRGHLVRQ ASLLLD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13944TRKRKS
2113129RRKASKKSKYRGVRRRP
3114130RRKASKKSKYRGVRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.13e-22ERF family protein