PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G01790.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 388aa MW: 42790.7 Da PI: 5.1867

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G01790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.5	7.6e-55	39	168	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ + e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk+ ONIVA03G01790.1 39 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQEhcgIGYDEQSEWYFFSYKDRKYPTGTRTNRATMAGFWKATGRDKA 131 69**************************.9***********953432233667******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 v++ k++l+g++ktLvfykgrap+g+ktdW+mheyrle ONIVA03G01790.1 132 VHD-KSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 168 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MLFILPHTQA SFLPTAREEN IQTMQAQVGD HMDAMESCVP PGFRFHPTDE ELVGYYLRKK 60 VASQKIDLDV IRDIDLYRIE PWDLQEHCGI GYDEQSEWYF FSYKDRKYPT GTRTNRATMA 120 GFWKATGRDK AVHDKSRLIG MRKTLVFYKG RAPNGQKTDW IMHEYRLETD ENAPPQRTAY 180 PARSMVETWD YSLHERNIMS AAAAAAFADP SAAYAQMRRQ HRSGRFKQEA ELDGAATALL 240 HYSSHLAELP QLESPSAAAA PLQPNPSQLA TAGEDDDCKG DNGGRRAKKA RAAGDKVATT 300 TDWRALDKFV ASQLSPGECG SMEATAEAAA AAVAGVSSPL DHGDDDMAAL LFLNSDERDE 360 VDRWTGLLGS GAGASGVDGD LGICVFDK

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MLFILPHTQA SFLPTAREEN IQTMQAQVGD HMDAMESCVP PGFRFHPTDE ELVGYYLRKK  60
VASQKIDLDV IRDIDLYRIE PWDLQEHCGI GYDEQSEWYF FSYKDRKYPT GTRTNRATMA  120
GFWKATGRDK AVHDKSRLIG MRKTLVFYKG RAPNGQKTDW IMHEYRLETD ENAPPQRTAY  180
PARSMVETWD YSLHERNIMS AAAAAAFADP SAAYAQMRRQ HRSGRFKQEA ELDGAATALL  240
HYSSHLAELP QLESPSAAAA PLQPNPSQLA TAGEDDDCKG DNGGRRAKKA RAAGDKVATT  300
TDWRALDKFV ASQLSPGECG SMEATAEAAA AAVAGVSSPL DHGDDDMAAL LFLNSDERDE  360
VDRWTGLLGS GAGASGVDGD LGICVFDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36160.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G01790.1