PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G34350.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HD-ZIP

Protein Properties

Length: 345aa MW: 37770.4 Da PI: 4.4431

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G34350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.6	1.4e-20	79	132	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k ONIVA02G34350.1 79 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 132 5678*************************************************9 PP
2	HD-ZIP_I/II	132.5	1.5e-42	78	170	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktkqlE+d+++Lk+++dal++++++L +++++L++++++ ONIVA02G34350.1 78 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMS 170 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MESGRLIFST AGSGAGQMLF LDCGAGGGGG GVGGGAMFHR GARPVLGMEE GGRGVKRPFF 60 TTPDELLEEE YYDEQLPEKK RRLTPEQVHL LERSFEEENK LEPERKTELA RKLGLQPRQV 120 AVWFQNRRAR WKTKQLERDF DRLKASFDAL RADHDALLQD NHRLHSQVMS LTEKLQEKET 180 TTEGSAGAAV DVPGLPAAAD VKVAVPDAEE PALEEAAAAF EEQQEQQVKA EDRLSTGSGG 240 SAVVDTDAQL VVGCGRQHLA AVDSSVESYF PGGDEYHDCV MGPMDHAAGG IQSEEDDGAG 300 SDEGCSYYAD DAVVLFADHG HHHHHQHADD DEEDGQQISC WWMWN

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MESGRLIFST AGSGAGQMLF LDCGAGGGGG GVGGGAMFHR GARPVLGMEE GGRGVKRPFF  60
TTPDELLEEE YYDEQLPEKK RRLTPEQVHL LERSFEEENK LEPERKTELA RKLGLQPRQV  120
AVWFQNRRAR WKTKQLERDF DRLKASFDAL RADHDALLQD NHRLHSQVMS LTEKLQEKET  180
TTEGSAGAAV DVPGLPAAAD VKVAVPDAEE PALEEAAAAF EEQQEQQVKA EDRLSTGSGG  240
SAVVDTDAQL VVGCGRQHLA AVDSSVESYF PGGDEYHDCV MGPMDHAAGG IQSEEDDGAG  300
SDEGCSYYAD DAVVLFADHG HHHHHQHADD DEEDGQQISC WWMWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	135	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-58	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G34350.1