PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G33860.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB
Protein Properties Length: 284aa    MW: 32450.6 Da    PI: 9.7968
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G33860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.2e-13107151348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       WT+eEde+l ++ k+   ++W ++ar+m+ gR++ +c+ rw+ +l
  ONIVA02G33860.1 107 EWTAEEDERLRRLAKENLFRQWWKVAREMP-GRSGDSCRARWRHHL 151
                      7*****************************.***********9886 PP
2Myb_DNA-binding22.82.1e-07159202348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      ++T+ +de lv++++  Gg  W++I+r +  gRt    ++rw +++
  ONIVA02G33860.1 159 PFTARDDEELVRLHRHTGGS-WRKISRSVY-GRTSAIMRDRWIQLR 202
                      79****************88.********9.****99999998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEEEKEEIAI PAVPVDFFQL MIDGSSKQWR WGRRGESSNR SQWREERLLI EKMSMRKKMQ  60
LGRYPCSRCN QPRSRGGETS MATAAAAAAA AAAKCRCSRR RRLPEREWTA EEDERLRRLA  120
KENLFRQWWK VAREMPGRSG DSCRARWRHH LARDVYHRPF TARDDEELVR LHRHTGGSWR  180
KISRSVYGRT SAIMRDRWIQ LRRSGLVPDA AKTAENAGCP PPAADDSEYM GSEAESKSPP  240
PPPQQQQHPL ADVLASSLDS CTLASDATDP RDGILALDFA FMSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.13e-22MYB family protein