PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G28810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 303aa    MW: 31658.2 Da    PI: 6.3008
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G28810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19148198255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f++aeeAa a+++a+ +++g
  ONIVA02G28810.1 148 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFDSAEEAAVAYDRAAYRMRG 198
                      8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MLLNPASREV AALDSIRHHL LEEEEETPAT APAPTRRPVY CRSSSFGSLV ADQWSESLPF  60
RPNDAEDMVV YGALRDAFSS GWLPDGSFAA VKPESQDSYD GSSIGSFLAS SSSEAGTPGE  120
VTSTEATVTP GIREGEGEAV AVASRGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTFD  180
SAEEAAVAYD RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA AAGNKRPYPD PAISGSSSPS  240
SSSSSSSSSS SGSPKRRKRG EAAAASMAMA LVPPPPPPAQ APVQLALPAQ PWFAAGPIQQ  300
LVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-41ERF family protein