PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G27820.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ERF

Protein Properties

Length: 471aa MW: 50476.4 Da PI: 8.6281

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G27820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.2	4.9e-19	223	273	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge ONIVA02G27820.1 223 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 273 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MDAVDRGGGG GGGGARGHGR RWKGKGVSAA ISSSAAETQQ PVPVLEDAPA AAALLRPQKK 60 IRSPDRRLQR SISSLSSAPA SPDSSSVSNP MSPPAMSLPN QPPSSRHIFP FAYDPSPGAA 120 APRLLPLLQY SSLYPQPLLP QQQSPLQNQQ MISFGSSQQQ QQPQFGAASP LFPPQFLPPE 180 EQQRLLLRYW SEALNLSPRG VRGGALRPSL YQHLLRAPGP PKLYRGVRQR HWGKWVAEIR 240 LPRNRTRLWL GTFDTAEDAA MAYDREAFKL RGENARLNFP DLFLGKGRTG GSGRTSASAA 300 ASCSSSSSSA PPTPDESHTQ QAQPQPQQPT EESSNTEPKP LLFVAEQDGI PEPELNPQLQ 360 TAEQHGNDGN TAMFQPSVTS GGIWGPADEA WFSAWGPGSS VWDYDMDSAH GLLLQSRLAG 420 EQTGMDYAYT APEVLVAPVP AAGTAMATAA SSSLPPRPPP PCHSPTFAWK D

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MDAVDRGGGG GGGGARGHGR RWKGKGVSAA ISSSAAETQQ PVPVLEDAPA AAALLRPQKK  60
IRSPDRRLQR SISSLSSAPA SPDSSSVSNP MSPPAMSLPN QPPSSRHIFP FAYDPSPGAA  120
APRLLPLLQY SSLYPQPLLP QQQSPLQNQQ MISFGSSQQQ QQPQFGAASP LFPPQFLPPE  180
EQQRLLLRYW SEALNLSPRG VRGGALRPSL YQHLLRAPGP PKLYRGVRQR HWGKWVAEIR  240
LPRNRTRLWL GTFDTAEDAA MAYDREAFKL RGENARLNFP DLFLGKGRTG GSGRTSASAA  300
ASCSSSSSSA PPTPDESHTQ QAQPQPQQPT EESSNTEPKP LLFVAEQDGI PEPELNPQLQ  360
TAEQHGNDGN TAMFQPSVTS GGIWGPADEA WFSAWGPGSS VWDYDMDSAH GLLLQSRLAG  420
EQTGMDYAYT APEVLVAPVP AAGTAMATAA SSSLPPRPPP PCHSPTFAWK D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	1e-37	ERF family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G27820.1