PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G24080.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 376aa MW: 40657.9 Da PI: 7.4041

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G24080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.9	1.9e-53	39	165	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+++yL +k+++ +++++ e+d++k+ePwdLp++++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkd+e+++ ONIVA02G24080.1 39 LPPGFRFHPTDEELITHYLLRKAADPAGFAARAVGEADLNKCEPWDLPSRATMGEKEWYFFCVKDRKYPTGLRTNRATESGYWKATGKDREIFR 132 79*******************9999666689***********988899************************************ PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfy+grap+g kt Wvmheyr+ ONIVA02G24080.1 133 -GKALVGMKKTLVFYTGRAPRGGKTGWVMHEYRI 165 .99***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MRLARRQQQQ QVVVAATMEN DVHHHRQMMQ QQQQQEMDLP PGFRFHPTDE ELITHYLLRK 60 AADPAGFAAR AVGEADLNKC EPWDLPSRAT MGEKEWYFFC VKDRKYPTGL RTNRATESGY 120 WKATGKDREI FRGKALVGMK KTLVFYTGRA PRGGKTGWVM HEYRIHGKHA AANSKQDQEW 180 VLCRVFKKSL ELAPAAAAAV GRRGAGAGTD VGPSSMPMAD DVVGLAPCAL PPLMDVSGGG 240 GGAGTASLSA TAGAAAAPPP AHVTCFSNAL EGQFLDTPYL LPAADPADHL AMSSASPFLE 300 ALQMQYVQDA AAAGGAGMVH ELLMGGGWYF NKGERERLSG ASQDTGLTSS EVNPGEISSS 360 SRQQRMDHHD ASLWAY

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MRLARRQQQQ QVVVAATMEN DVHHHRQMMQ QQQQQEMDLP PGFRFHPTDE ELITHYLLRK  60
AADPAGFAAR AVGEADLNKC EPWDLPSRAT MGEKEWYFFC VKDRKYPTGL RTNRATESGY  120
WKATGKDREI FRGKALVGMK KTLVFYTGRA PRGGKTGWVM HEYRIHGKHA AANSKQDQEW  180
VLCRVFKKSL ELAPAAAAAV GRRGAGAGTD VGPSSMPMAD DVVGLAPCAL PPLMDVSGGG  240
GGAGTASLSA TAGAAAAPPP AHVTCFSNAL EGQFLDTPYL LPAADPADHL AMSSASPFLE  300
ALQMQYVQDA AAAGGAGMVH ELLMGGGWYF NKGERERLSG ASQDTGLTSS EVNPGEISSS  360
SRQQRMDHHD ASLWAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	5e-84	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G24080.1