PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G22300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 343aa MW: 38906.5 Da PI: 7.9463 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00018 | 66 | 88 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H +H ONIVA02G22300.1 66 CSyeGCGKTFVDAGALRKHAHVH 88 77779**************9887 PP | |||||||
2 | zf-C2H2 | 15.5 | 5e-05 | 93 | 117 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ C+k F ++s LkrH H ONIVA02G22300.1 93 YVCHyaGCDKKFLDSSKLKRHFLIH 117 9********************8877 PP | |||||||
3 | zf-C2H2 | 21.9 | 4.7e-07 | 123 | 147 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nLk H++tH ONIVA02G22300.1 123 FVCPheGCGKAFSLDFNLKAHMKTH 147 89**********************9 PP | |||||||
4 | zf-C2H2 | 13.4 | 0.00023 | 153 | 178 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C+ C ++F++ s L+ Hi+ H ONIVA02G22300.1 153 HVCKypECARRFTQESKLRAHIKQqH 178 789999****************9877 PP | |||||||
5 | zf-C2H2 | 12.1 | 0.00061 | 221 | 246 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp C k + + + L+ H+++ H ONIVA02G22300.1 221 YVCPydGCAKAYIHEYKLNLHLKKeH 246 99*********************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MMQTAGRRRH RWVKEWVPQD LVVAGGPCAL YKWVREDRLS ALKSRDKEQE AELAKPEPTT 60 EVLFLCSYEG CGKTFVDAGA LRKHAHVHGE RQYVCHYAGC DKKFLDSSKL KRHFLIHTGE 120 KNFVCPHEGC GKAFSLDFNL KAHMKTHSAD NYHVCKYPEC ARRFTQESKL RAHIKQQHEK 180 GGLQNPGGSA TNRSGLADHS HNSHTPKPSA APPTPSADRP YVCPYDGCAK AYIHEYKLNL 240 HLKKEHPNHY QDAGAQATSS KMSKRRSKPS LMAKMPLPKV PKRRGYTEPY QPPVSVVEEH 300 QWPRNVLYED DSEETEEEGD NVGDGARYRA ASSDDDEETE DEE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 278 | 284 | PKVPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 6e-98 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G22300.1 |