PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G22270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 719aa MW: 75975.8 Da PI: 10.131 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.8 | 1e-07 | 222 | 266 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++W+ eEd l +v+++G g+W I ++ Rt q++ rw ONIVA02G22270.1 222 KPWSREEDMELGAGVQKHGEGNWMEILHKYKfdSSRTHLQLQQRW 266 68******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 719 aa Download sequence |
MKKEFPGQAP TSRLHSEMDA AAAGGGGAAK RKRSFSEDDA YLILHRYQPA TILTMLQEMG 60 KQVGAGKGID WRALVRRTST GITSAREYQM LWRHLAYGHE FVESVEPASL PLDDGSDLEC 120 EIEIVPAPGN EALAEATSFA KTIITGSSRE QTSGQRVNSE AAALNTPNEK IVRVPSDKQL 180 VPGHRLTNGT GPVSSSKQPS HTGSSPDPLD PNGHPKKKKK PKPWSREEDM ELGAGVQKHG 240 EGNWMEILHK YKFDSSRTHL QLQQRWALIC KRQGSTKPAT PKIPNVMSEE LKAAQKAFSL 300 AIGTTRSSTL RPGGVPHHNP MVTTTTPEVK SVTAPSPLPV PVHVVPVPVP VQPVQVQLPP 360 PQLHQAPAQS APPPLKVSNA SNKSRNNSKK QVAQSIPVNG PLSIQEAALA AGGRIAEPSV 420 ATNFLKAAQS TKAVHIRSRG TGSSKSSTGS KTPTVAGEPG TQLGSDQHLE LQSTGGPSQV 480 LTAHATEQVH NVSEVAGVNP LGQSAGVHLS ETKKALNTTP VSGSSDKMEI DDNSNYFAVT 540 MEDLFPEDVK QEDVQDPKIE EAIDPKDADM LEFDRFVAQG CLNKDNVDKS KAAKIAPEAQ 600 SVIGSQKKQL KTLPTVGKSN PVFAGPPATA KKTKAPVPQG GMSSGIVGVL NRSLGGKAPA 660 PATTGTQSTV QKQQSMSSKG NLLVPKNVAP GTVTPANNRA NTAVNGASKV NPPASQKPA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 215 | 221 | PKKKKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.1 | 3e-39 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G22270.1 |