PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G18870.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 24268.3 Da PI: 8.6427 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.8 | 2.3e-12 | 89 | 130 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ gt eeAa+++++a+ ONIVA02G18870.3 89 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 130 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MMMSRKDSLP VDFPKPSDNE NSVEVAHPNI KPFSVHPLPL TKNSDVLLES SNGSDSLKEE 60 KNHYYPGKEI KRRKRHRRKQ YVDQEPCIMR GVYFKNMKWQ AAIKVDKKQI HLGTVGTQEE 120 AARLYDRAAF MCGREPNFEL SEEEKKELQN YTWKDFLDMT RDTITSKKQR KVGLIRRNKT 180 DSLVGQSDGD TEMINGGGSS HSEDGDAETS AS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 5e-47 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G18870.3 |