PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G18870.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 265aa    MW: 29925 Da    PI: 8.8459
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G18870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.33.3e-12142183351
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                       +GV++  k+ +W A I++      +k+++lg+ gt eeAa+++++a+ 
  ONIVA02G18870.1 142 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 183
                      79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MMMSRRLFGY SFRRVSVKAD LCLHVTLVGL LSDDTALLRI VLDIAALAIA NVSVKCSGKD  60
SLPVDFPKPS DNENSVEVAH PNIKPFSVHP LPLTKNSDVL LESSNGSDSL KEEKNHYYPG  120
KEIKRRKRHR RKQYVDQEPC IMRGVYFKNM KWQAAIKVDK KQIHLGTVGT QEEAARLYDR  180
AAFMCGREPN FELSEEEKKE LQNYTWKDFL DMTRDTITSK KQRKVGLIRR NKTDSLVGQS  240
DGDTEMINGG GSSHSEDGDA ETSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-46ERF family protein