PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G12020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 374aa MW: 36927.4 Da PI: 7.6969

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G12020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113.8	7.4e-36	45	101	6	62
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 cprC+s +tkfCyynnys++qPryfC++CrryWt+GG+lrnvPvGgg+rk+k+ss ONIVA02G12020.1 45 PCCPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSKRSS 101 569***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MASGGALSPV EEKPAVVKTT KAEQHEEEAA VAVKSAAEMM KKSSPCCPRC NSIKTKFCYY 60 NNYSMAQPRY FCRECRRYWT QGGSLRNVPV GGGCRKSKRS SASSASASAA SPPAPAVGAA 120 APPVVPALSS AISKLLQSEP MAAPCADFPN VLPTFVSTGF ELPAAAGDRL SRGSFGAFGN 180 LSAAVAAPGG GGGSSTTTSF MDMLRGVGGL FDGVGNSHQM GGNGGGGGSY YAPLITGAGN 240 GMLMPPPPLP PFSGSLMQHG MQGLFANHAM GGGGGGVMNA GEDGSVMAGL GGGQWPPALG 300 GADEQQGGGD GGEAVMTKDT GGGASSSASR PDYFYGWNSA GGGVIAGGGI GGNAAAATGA 360 TPWQGLIDSS SAMM

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MASGGALSPV EEKPAVVKTT KAEQHEEEAA VAVKSAAEMM KKSSPCCPRC NSIKTKFCYY  60
NNYSMAQPRY FCRECRRYWT QGGSLRNVPV GGGCRKSKRS SASSASASAA SPPAPAVGAA  120
APPVVPALSS AISKLLQSEP MAAPCADFPN VLPTFVSTGF ELPAAAGDRL SRGSFGAFGN  180
LSAAVAAPGG GGGSSTTTSF MDMLRGVGGL FDGVGNSHQM GGNGGGGGSY YAPLITGAGN  240
GMLMPPPPLP PFSGSLMQHG MQGLFANHAM GGGGGGVMNA GEDGSVMAGL GGGQWPPALG  300
GADEQQGGGD GGEAVMTKDT GGGASSSASR PDYFYGWNSA GGGVIAGGGI GGNAAAATGA  360
TPWQGLIDSS SAMM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	4e-29	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G12020.1