PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G01060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 418aa MW: 47750 Da PI: 8.6166 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.6 | 5.2e-06 | 110 | 132 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg sF + +Lk+H+++H ONIVA02G01060.1 110 HTCQECGASFQKPAHLKQHMQSH 132 79*******************99 PP | |||||||
2 | zf-C2H2 | 21.8 | 5e-07 | 138 | 162 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dC+ s+ rk++L+rH+ +H ONIVA02G01060.1 138 FICPleDCPFSYIRKDHLNRHMLKH 162 78*********************99 PP | |||||||
3 | zf-C2H2 | 15.4 | 5.4e-05 | 167 | 192 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C+ Cg+ Fs k n++rH + H ONIVA02G01060.1 167 FTCSmdGCGRKFSIKANMQRHVKEiH 192 89********************9988 PP | |||||||
4 | zf-C2H2 | 15.6 | 4.5e-05 | 204 | 228 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ C+k+F+ s +k+H +H ONIVA02G01060.1 204 FVCKeeGCNKVFKYASKMKKHEESH 228 89*******************9988 PP | |||||||
5 | zf-C2H2 | 17.7 | 1e-05 | 294 | 318 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C sFs+ksnL++Hi+ H ONIVA02G01060.1 294 KCSfeGCECSFSNKSNLTKHIKAsH 318 688899***************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MKARRNQEPQ SSLPAAAAAA PSSSRRSAGN HTSSQPRSPP MCSGDDIDGD TRVEATQHRD 60 IRRYKCEFCT VVRSKKCLIR AHMVAHHKEE LDKSEIYKSN GEKVVHEGDH TCQECGASFQ 120 KPAHLKQHMQ SHSDERSFIC PLEDCPFSYI RKDHLNRHML KHQGKLFTCS MDGCGRKFSI 180 KANMQRHVKE IHEDETATKS NRQFVCKEEG CNKVFKYASK MKKHEESHVK LDYVEVVCCE 240 PGCMKTFTNV ECLRAHNQAC HQYVQCDICG EKHLKKNIKR HLRAHEVPST ERIKCSFEGC 300 ECSFSNKSNL TKHIKASHDQ VKPFACRFTG CEKVFPYKHV RDNHEKSSAH VYTQANFTEM 360 DEHLLSCPRG GRKRKAVTVE TLTRKRVTMH GDASSLDNGT EYLRWLLSGG DDDSSQTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-103 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G01060.1 |