PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G50300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 22888.3 Da PI: 8.9855 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.5 | 2.9e-17 | 75 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 g+ GVr ++ +gr++AeIrd + ng r++lg+f tae Aa a+++a+++ +g ONIVA01G50300.1 75 GFIGVRKRP-WGRFAAEIRDSTRNG--VRVWLGTFETAEAAAMAYDQAALSARG 125 789******.**********44465..***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MEQHSHCWYY GGGMAVTAAA GAGAASSTSS ESQPSGYDYE TAGSAEVSAP GGGAGRERAA 60 RKEEGGAGAA AAAAGFIGVR KRPWGRFAAE IRDSTRNGVR VWLGTFETAE AAAMAYDQAA 120 LSARGAAAAL NFPVERVRES LRALALGAAG GSPVLALKGR HSKRKRRKRS ELAGATATAN 180 KTTTTTSATT GGEHKQIVLE LEDLGADYLE ELLWMSEQTS H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 163 | 168 | KRKRRK |
2 | 163 | 169 | KRKRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 5e-19 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G50300.1 |