PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G48480.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 228aa    MW: 24444.6 Da    PI: 8.9179
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G48480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.85.2e-33211451128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.tgkrknratk.sgyWkatgkdkev 92 
                      lp GfrF+Ptdeel+ +yL++kv +++l++ +vi+ +d+ +++PwdLp    +++ e yfF+  +++   +g   +ra    g W+a+gk+k v
  ONIVA01G48480.1  21 LPIGFRFRPTDEELLLHYLRRKVMSRPLPA-DVIPVADLARLHPWDLP---GEGDGERYFFHLPATSCWrRGGGGSRAGGgGGAWRASGKEKLV 110
                      699***************************.99***************...346778999998887776258888886443899********** PP

              NAM  93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++   +++ vg k+tLvf+   ++ g +tdW mheyrl
  ONIVA01G48480.1 111 VAPrcGKRPVGAKRTLVFF---RRGGARTDWAMHEYRL 145
                      *99888999**********...567889********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAAEAASGGG GGCRMLPQAG LPIGFRFRPT DEELLLHYLR RKVMSRPLPA DVIPVADLAR  60
LHPWDLPGEG DGERYFFHLP ATSCWRRGGG GSRAGGGGGA WRASGKEKLV VAPRCGKRPV  120
GAKRTLVFFR RGGARTDWAM HEYRLLPADD HPPEANDVWV VCRVFKKTTT LAHRRSPPSI  180
RGAPRRRAAA ADDDDMPSSP SSCVTDGGDA GEEGEESSSC SVVASNCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-32NAC family protein