PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G46140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 1286aa MW: 142147 Da PI: 8.8425 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.001 | 1192 | 1214 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L +H ++H ONIVA01G46140.1 1192 CPvkGCGKKFFSHKYLLQHRKVH 1214 9999*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1286 aa Download sequence |
MRPSPPPAAP AAEPVPPWLR SLPVAPEFRP TAAEFADPVS YILKIEPAAA PYGICKVVPP 60 LPPPPKKATF SNLSRSFAAL HPDDRSPSFP TRHQQVGLCP RRTRPGLKPV WRSSHRYTLP 120 QFESKAGATR KSLLAGLNFP ASRQLTPLDH EVLFWRASAD RPIVVEYGSD MSGSGFSPCA 180 AQPQPPPQQQ PTARAAAHLG ETAWNMRGVA RSPGSLLRFM PEDVPGVTTP MLYVGMMFSW 240 FAWHVEDHDL HSLNYMHLGA AKTWYGVPRD AALAFEDVVR EHGYGGEVNP LETFATLGQK 300 TTVMSPEVLV ESGIPCCRLV QNAGEFVVTF PGSYHCGFSH GFNCGEASNI ATPEWLRIAK 360 EAAIRRASIN RPPMVSHYQL LYDLALSMRF REPSNGEMET RSSRIKEKKK CEGEQLVKKM 420 FIQNVIEDNE LLSHLLNDGS SCIILPANAH DGPGLSTLRS TDQSNMNSRI SHNLCSREEA 480 PEASGCLSPN RNGDTRNCIS SDTHNMEGDK GDIMSATGLL DQGLLSCVTC GILSFSCVAV 540 LKPRDSTARY LMSADSNSIN NQFSISGGSI LADAPTNERN DVISRPYSEH CCNEIMADDA 600 EIDKNSALDL LAFAHGGQSD PEEDPLEKIL KIAHGINKSQ PNSSNNVGCV GTKLSSSSTE 660 RQERPSSQNA HCNGSSVISN GLKGVRTRNK YQLKMVLSEG FQAKDIYSAK EKKVQSEPSS 720 SKGDVKETID VSGTENDVGC KSTTISVSEH RGSTKNMYSV KEKKVQSKPS SLKGTVKETV 780 DVSGTENDAR CKSITISVSE HRGSTPMTNS LAASIVKPDK DSSRMHVFCL EHAIEVEKQL 840 HAIGGSNIML ICRPEYPKIE AEARLLGEEM GLVYDWKGIH FKEANMEDRQ KIQEVLRDEE 900 AIPTSSDWAV KLGINLYYSA NLAKSPLYNK QMPYNRVIYR AFGCDSPNDS PVMFNTCERK 960 QSHQKKIVVA GRWCGKVWMS KQVHPYLAHR VESQEAEEAD RICSYHFDEK HKAEPVGNSS 1020 RVEASKRKSS SLTDVTESSN RRGEIPGEET NTKRPKHSQE NNLRALETAA EVVVPSPAGT 1080 GLRVSSRIAN RANKLKSKME KEDVPSSRPK SNIKEKSSHA SGQKSNVQEA NANSASHLRA 1140 MPPKQKAEAE AKKQIRTPKP PKQAVEYSCD IEGCSMSFRT KRDLSLHKSD ICPVKGCGKK 1200 FFSHKYLLQH RKVHTDDRPL TCPWKGCNMA FKWPWARTEH LRVHTGDRPY VCHEPGCAQT 1260 FRFVSDFSRH KRKTGHSVKK KKKAKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48430.1 | 0.0 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G46140.1 |