PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G45910.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 275aa    MW: 30505.7 Da    PI: 6.717
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G45910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS209.42e-6472274167374
             GRAS 167 kfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
                       +Ae lg+ +ef+  + + le+l++++L v+ +Ea+a+n+vl+lh++++es    +   +vL+++++lsP+ +v+veq+a hn++ Fl rf+ea
  ONIVA01G45910.1  72 AYAEGLGMYLEFRG-INRGLESLHIDDLGVDADEAVAINSVLELHSVVKESRGALN---SVLQTIRKLSPRAFVLVEQDAGHNGPFFLGRFMEA 161
                      58999*********.799******************************88877777...8********************************** PP

             GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrvee 353
                      l+yy+alfd+l+a lpr +  r  vE++ +g ei+nvv cega+r+erhe++ +Wr+r+++aGF++vp++    ++a+  l + + +dgy+v +
  ONIVA01G45910.1 162 LHYYAALFDALDAALPRYDARRERVEQFHFGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSVPIKMA--AKAREWLDENAgGDGYTVAD 253
                      *********************************************************************754..467777777777******** PP

             GRAS 354 esgslvlgWkdrpLvsvSaWr 374
                      e+ +lvlgWk++p++++S+W+
  ONIVA01G45910.1 254 EKVCLVLGWKGKPVIAASCWK 274
                      ********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEMDKFSSSY QPSWPPAQAT VDVVGSVETP ARRAFQRVAS FFVQELLDRR ASAGAGPCEH  60
GVLHPAVVVR EAYAEGLGMY LEFRGINRGL ESLHIDDLGV DADEAVAINS VLELHSVVKE  120
SRGALNSVLQ TIRKLSPRAF VLVEQDAGHN GPFFLGRFME ALHYYAALFD ALDAALPRYD  180
ARRERVEQFH FGAEIRNVVG CEGAARVERH ERADQWRRRM SRAGFQSVPI KMAAKAREWL  240
DENAGGDGYT VADEKVCLVL GWKGKPVIAA SCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.19e-34GRAS family protein