PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA01G44590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 19911.1 Da PI: 7.9777 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.4 | 1.3e-16 | 19 | 69 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+Wv+eIr+p + r r +lg++ t+e Aa a++ a l+g ONIVA01G44590.1 19 CRYRGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATPEAAAVAHDTAVYFLRG 69 78*****777.**********943...5*********************999997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence |
MSRAECGGGG GGGEEEERCR YRGVRRRRWG KWVSEIRVPG TRERLWLGSY ATPEAAAVAH 60 DTAVYFLRGG AGDGGGGGAT LNFPERAAAT YGGGVARLSP RSVQRVASDA GMAADAQLVA 120 ARDAAPAPAP ATAYARPDHC AGATTARHDE LARRGMYGAH AHAAGANART SGERQLVCAE 180 EISVDDMEIL M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G22810.1 | 4e-24 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA01G44590.1 |