PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G43260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 349aa    MW: 36202.5 Da    PI: 6.3474
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G43260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-20127176255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g
  ONIVA01G43260.1 127 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 176
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MTVAGASELM SGYYQAQEMS TMVSALARVV AGGGGGDGDG DQWAWSSPSP SSSAAAAAAR  60
GVQERRREEQ AMHELAGYAC GGAPSPEFAG SEQSSDTQSA SAATMDEHHS PVGGGGNAEG  120
PDTPRRRYRG VRQRPWGKWA AEIRDPHKAA RVWLGTFETA EAAARAYDEA ALRFRGSRAK  180
LNFPEDARLY PTAATTTTAA PPPAPVAAAS PSAAIYPGAS QSAEYLRYQM LLQGRLTTAT  240
PNQGTLLPFY GGGGGGGSMT NPYGGGGGGA MSGFLGSYYS FPTPSVSVAT VPSSTSSAPG  300
NYYSSHGGSH QSMSAAEEWN WENALVYPAT AASWSESSYH HHPPPPHTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.16e-20ERF family protein