PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G42870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 28289.5 Da PI: 5.1936 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.8 | 2.8e-42 | 9 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 +pGfrF Pt+eel+++yL++k++g + ++e+vi+ +d+y+v+P +L + + e + w++F++r++++a+g r++r+t sgyWka ONIVA01G42870.1 9 APGFRFYPTEEELICFYLRNKLDGLRDDIERVIPVFDVYSVDPLQLSEihhemlG--GggeEGEPWFYFCPRQEREARGGRPSRTTPSGYWKAA 100 59***************************99***************854555431..14335669***************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g+ v+s++++ +g+kkt+vfy+grap+g+kt W m+eyr+ ONIVA01G42870.1 101 GTPGVVYSADRRPIGMKKTMVFYRGRAPSGTKTAWKMNEYRA 142 ****************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MADGGGRRAP GFRFYPTEEE LICFYLRNKL DGLRDDIERV IPVFDVYSVD PLQLSEIHHE 60 MLGGGGEEGE PWFYFCPRQE REARGGRPSR TTPSGYWKAA GTPGVVYSAD RRPIGMKKTM 120 VFYRGRAPSG TKTAWKMNEY RAFHYPDASS ASASSAGAAA PPNHLPPQLR SEFSLCRLYT 180 RSGGIRQFDR RPLAGGGDEN PGPSMAAAAA SPEENDGSGS SMQQLELMDQ GGAVDPDWDQ 240 WEDLATLTAL LYWPRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 9e-62 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G42870.1 |