PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G41940.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | G2-like | ||||||||
Protein Properties | Length: 265aa MW: 27468.8 Da PI: 6.3065 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.4 | 3.6e-29 | 140 | 193 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++WtpeLH+rFveav++L G++ A+Pk+i++lm+v+gLt+e+v+SHLQkYRl ONIVA01G41940.3 140 KARMVWTPELHHRFVEAVAHL-GEKGAVPKAIVRLMNVDGLTRENVASHLQKYRL 193 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 47 | 5.9e-15 | 142 | 192 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e++ ++v+av+ lG + +k+I r m+ g+t++++ s++qky+ ONIVA01G41940.3 142 RMVWTPELHHRFVEAVAHLGEKgaVPKAIVRLMNvDGLTRENVASHLQKYR 192 789***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MLSARGGRPH DADAPLPSSS SSSSSSSSSS PSRRMVDAAA ASGDACGRVT EWETGLPAPG 60 EMTPVSHQLV PPALAAAFGI DLAAVGVLLP SPSVDSPVSH LFFPVDEDDD EDEEGEGEGG 120 NDDAPAAAAA GGGGGRCGKK ARMVWTPELH HRFVEAVAHL GEKGAVPKAI VRLMNVDGLT 180 RENVASHLQK YRLYLKRTRV AATPPPSPPP PPPPPPPLPP AMYVPCFAAK PPLDAANRSD 240 SPPSRTSDAT TKHFKFMQRA VSNAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05090.1 | 1e-28 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G41940.3 |