PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G41940.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | G2-like | ||||||||
Protein Properties | Length: 257aa MW: 26608.8 Da PI: 5.5854 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.5 | 3.5e-29 | 140 | 193 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++WtpeLH+rFveav++L G++ A+Pk+i++lm+v+gLt+e+v+SHLQkYRl ONIVA01G41940.2 140 KARMVWTPELHHRFVEAVAHL-GEKGAVPKAIVRLMNVDGLTRENVASHLQKYRL 193 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.6e-15 | 142 | 192 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e++ ++v+av+ lG + +k+I r m+ g+t++++ s++qky+ ONIVA01G41940.2 142 RMVWTPELHHRFVEAVAHLGEKgaVPKAIVRLMNvDGLTRENVASHLQKYR 192 789***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MLSARGGRPH DADAPLPSSS SSSSSSSSSS PSRRMVDAAA ASGDACGRVT EWETGLPAPG 60 EMTPVSHQLV PPALAAAFGI DLAAVGVLLP SPSVDSPVSH LFFPVDEDDD EDEEGEGEGG 120 NDDAPAAAAA GGGGGRCGKK ARMVWTPELH HRFVEAVAHL GEKGAVPKAI VRLMNVDGLT 180 RENVASHLQK YRLYLKRTRV AATPPPSPPP PPPPPPPLPP AMYVPCFAAK PPLDAANRSD 240 SPPSRTSDAT TKQCYSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05090.1 | 7e-29 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G41940.2 |