PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G39370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 131aa MW: 14677.1 Da PI: 7.9696 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.4 | 1e-19 | 17 | 68 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd s + r++lg+f+taeeAa+a+++ + +++g+ ONIVA01G39370.1 17 KYRGVRRRP-WGKFAAEIRDSSR---HgVRVWLGTFDTAEEAARAYDRSAYSMRGA 68 8********.**********432...25*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MDHHQQQQQQ EGELVAKYRG VRRRPWGKFA AEIRDSSRHG VRVWLGTFDT AEEAARAYDR 60 SAYSMRGANA VLNFPADAHI YARQLHNNNA AAGSSSSSSA AAAAARPPPI EFEYLDDHVL 120 QEMLRDHTTN K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43410.1 | 3e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G39370.1 |