PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G38670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 24270.5 Da PI: 9.9084 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66 | 7.6e-21 | 32 | 83 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr ++ +gr++AeIrdp k+ r++lg+++taeeAa+a++aa+++++g+ ONIVA01G38670.1 32 PHYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREFRGA 83 68********.**********83...36*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MAPRAATVEK VAVAPPTGLG LGVGGGVGAG GPHYRGVRKR PWGRYAAEIR DPAKKSRVWL 60 GTYDTAEEAA RAYDAAAREF RGAKAKTNFP FASQSMVGCG GSPSSNSTVD TGGGGVQTPM 120 RAMPLPPTLD LDLFHRAAAV TAVAGTGVRF PFRGYPVARP ATHPYFFYEQ AAAAAAAEAG 180 YRMMKLAPPV TVAAVAQSDS DSSSVVDLAP SPPAVTANKA AAFDLDLNRP PPVEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 9e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G38670.1 |