PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G28490.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 294aa    MW: 31133.3 Da    PI: 4.2452
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G28490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.74e-2096146155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAa+ +++a+ +l+g
  ONIVA01G28490.1  96 TKFRGVRRRP-WGKFAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDNAAIQLRG 146
                      69********.**********88.....55*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSRLRTVRIF WDDPDLTDSS GEDEGCGGRR VGSMVRELPP AQLPVAQAGF APAAALPEQC  60
SGGDGDMGRR VVGGGCTVGV GRRRLTKGGG PGAPSTKFRG VRRRPWGKFA AEIRDPWRGV  120
RVWLGTFDTA EEAARVYDNA AIQLRGPSAT TNFSASTNSA GAQDPVAVGY ESGAESSPAV  180
SSPTSVLRKV PSLCSLAEDK DDYEAGPCEP ATAAGSNLTV LEEEELGEFV PFEDAPVYGG  240
SSFWDFEPES GFLYAEPSSP ETPWDAGATS SGEAQDYFQD LRDLFPLNPL PAIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.11e-24ERF family protein