PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G27720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 493aa MW: 51928.2 Da PI: 4.9693 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 418.5 | 5.9e-128 | 84 | 447 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 lv+lL++cA a+++gd++la+a La + a ++++ + R+a +ft AL++rl+ + ++p +t +e+++ ++ f+e++P+lk ONIVA01G27720.1 84 LVHLLMSCAGAIEAGDHALASAQLADSHAAlaAVSAASGIGRVAVHFTTALSRRLFP------SPVAPPTT----DAEHAFLYHHFYEACPYLK 167 68***********************9998875667779******************9......44444444....4899999************ PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186 f+h+taNqaIlea++g+++vH iDf+++qGlQWpaL+qaLa Rp+gpp lRiTg+g+p+++ ++el+ +g rLa++A++++v+f+f+ ++a++l ONIVA01G27720.1 168 FAHFTANQAILEAFHGCDHVHLIDFSLMQGLQWPALIQALALRPGGPPFLRITGIGPPSPTGRDELRDVGLRLADLARSVRVRFSFRGVAANSL 261 ********************************************************************************************** PP GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280 +++++++L++ pgEa+a n+vlqlhrll ++++++ +d+vL++v s++Pk+++v+eqeadhn++ Fl+rf+eal yysa+fdsl+a ++ ONIVA01G27720.1 262 DEVRPWMLQIAPGEAVAFNSVLQLHRLLGDPADQAP-IDAVLDCVASVRPKIFTVIEQEADHNKTGFLDRFTEALFYYSAVFDSLDAA-SASGG 353 ****************************99998888.************************************************998.44558 PP GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + + + +++l+rei+++v+ ega+rrerhe l++Wr+rl++aG+++vpl+++a qa++l+ ++++g++vee +g+l+lgW++rpL+s+SaW+ ONIVA01G27720.1 354 AGNAMAEAYLQREICDIVCGEGAARRERHEPLSRWRDRLTRAGLSAVPLGSNALRQARMLVGLFSGEGHSVEEADGCLTLGWHGRPLFSASAWE 447 888888889************************************************************************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence |
MDTFPFQWPM DPAASSGLDP GFLPPPAAVA PDDGVGYYDP PAGADVDAAA LPEFAAAFPP 60 CAPDAAAAVL AMRREEEEVA GIRLVHLLMS CAGAIEAGDH ALASAQLADS HAALAAVSAA 120 SGIGRVAVHF TTALSRRLFP SPVAPPTTDA EHAFLYHHFY EACPYLKFAH FTANQAILEA 180 FHGCDHVHLI DFSLMQGLQW PALIQALALR PGGPPFLRIT GIGPPSPTGR DELRDVGLRL 240 ADLARSVRVR FSFRGVAANS LDEVRPWMLQ IAPGEAVAFN SVLQLHRLLG DPADQAPIDA 300 VLDCVASVRP KIFTVIEQEA DHNKTGFLDR FTEALFYYSA VFDSLDAASA SGGAGNAMAE 360 AYLQREICDI VCGEGAARRE RHEPLSRWRD RLTRAGLSAV PLGSNALRQA RMLVGLFSGE 420 GHSVEEADGC LTLGWHGRPL FSASAWEAAG DGGGDNNNNS NSHVSGSSGS DSNNSGSSNG 480 KSSGARDGSS VCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 1e-115 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G27720.1 |