PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G12610.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 495aa MW: 55460 Da PI: 5.1649

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G12610.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.2	4.8e-51	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGf FhP+d el+++yLkkk++g+k+e e+i+evdiyk+ePwdLp+ v +++++w+fF+ rd+ky++g+r+nrat +gyWk+tgkd+++ ONIVA01G12610.3 15 LPPGFGFHPKDTELISHYLKKKIHGQKIEY-EIIPEVDIYKHEPWDLPAkcDVPTKDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAI 107 79**************************.99***********5346667999********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g+kktLvf++gr p+g++t+W+mhey + ONIVA01G12610.3 108 KM-GKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYI 142 9.99****************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MLGIWTMESL RDMVLPPGFG FHPKDTELIS HYLKKKIHGQ KIEYEIIPEV DIYKHEPWDL 60 PAKCDVPTKD NKWHFFAARD RKYPNGSRSN RATVAGYWKS TGKDRAIKMG KQTIGTKKTL 120 VFHEGRPPTG RRTEWIMHEY YIDERECQAC PDMKDAYVLC RITKRNDWIP GNGNELDNSD 180 PHPEPYDAPP SVISTEQLNL AAEPVVGVEA APVTVAEPDG VTTSAITANI PSPSDDINLD 240 DWLNELFDPF FDPEQSLASA DLSPDEQNVE SSNVGALAPK VEQDYSSPNE NVVDDTEYLL 300 PEDVYNILHP GTDDFNMLQN PLDQYPIQYA TDVWSGIQKE ELWSPQANAE PSQSNEAADN 360 GIIRRYRSMK TPETSVPQFK GKTQAKMRVG INKMATSSSE SINQTIKFEN SGRLVEHQKN 420 QAHYVASTKR SDAGKPSTEL SSNRGFLRGI RNAFAGCSDA RWNMILVAGF AIGVAVVALH 480 IGQRLGLSQR DQQHT

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MLGIWTMESL RDMVLPPGFG FHPKDTELIS HYLKKKIHGQ KIEYEIIPEV DIYKHEPWDL  60
PAKCDVPTKD NKWHFFAARD RKYPNGSRSN RATVAGYWKS TGKDRAIKMG KQTIGTKKTL  120
VFHEGRPPTG RRTEWIMHEY YIDERECQAC PDMKDAYVLC RITKRNDWIP GNGNELDNSD  180
PHPEPYDAPP SVISTEQLNL AAEPVVGVEA APVTVAEPDG VTTSAITANI PSPSDDINLD  240
DWLNELFDPF FDPEQSLASA DLSPDEQNVE SSNVGALAPK VEQDYSSPNE NVVDDTEYLL  300
PEDVYNILHP GTDDFNMLQN PLDQYPIQYA TDVWSGIQKE ELWSPQANAE PSQSNEAADN  360
GIIRRYRSMK TPETSVPQFK GKTQAKMRVG INKMATSSSE SINQTIKFEN SGRLVEHQKN  420
QAHYVASTKR SDAGKPSTEL SSNRGFLRGI RNAFAGCSDA RWNMILVAGF AIGVAVVALH  480
IGQRLGLSQR DQQHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	1e-66	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G12610.3