PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G12610.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 536aa MW: 59708.8 Da PI: 6.1693

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G12610.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164	5.6e-51	56	183	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGf FhP+d el+++yLkkk++g+k+e e+i+evdiyk+ePwdLp+ v +++++w+fF+ rd+ky++g+r+nrat +gyWk+tgkd+++ ONIVA01G12610.2 56 LPPGFGFHPKDTELISHYLKKKIHGQKIEY-EIIPEVDIYKHEPWDLPAkcDVPTKDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAI 148 79**************************.99***********5346667999********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g+kktLvf++gr p+g++t+W+mhey + ONIVA01G12610.2 149 KM-GKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYI 183 9.99****************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MASMANQHPP QRRARASSGV PAARARGGRG CTGEPSRRAA LILPIWTMES LRDMVLPPGF 60 GFHPKDTELI SHYLKKKIHG QKIEYEIIPE VDIYKHEPWD LPAKCDVPTK DNKWHFFAAR 120 DRKYPNGSRS NRATVAGYWK STGKDRAIKM GKQTIGTKKT LVFHEGRPPT GRRTEWIMHE 180 YYIDERECQA CPDMKDAYVL CRITKRNDWI PGNGNELDNS DPHPEPYDAP PSVISTEQLN 240 LAAEPVVGVE AAPVTVAEPD GVTTSAITAN IPSPSDDINL DDWLNELFDP FFDPEQSLAS 300 ADLSPDEQNV ESSNVGALAP KVEQDYSSPN ENVVDDTEYL LPEDVYNILH PGTDDFNMLQ 360 NPLDQYPIQY ATDVWSGIQK EELWSPQANA EPSQSNEAAD NGIIRRYRSM KTPETSVPQF 420 KGKTQAKMRV GINKMATSSS ESINQTIKFE NSGRLVEHQK NQAHYVASTK RSDAGKPSTE 480 LSSNRGFLRG IRNAFAGCSD ARWNMILVAG FAIGVAVVAL HIGQRLGLSQ RDQQHT

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MASMANQHPP QRRARASSGV PAARARGGRG CTGEPSRRAA LILPIWTMES LRDMVLPPGF  60
GFHPKDTELI SHYLKKKIHG QKIEYEIIPE VDIYKHEPWD LPAKCDVPTK DNKWHFFAAR  120
DRKYPNGSRS NRATVAGYWK STGKDRAIKM GKQTIGTKKT LVFHEGRPPT GRRTEWIMHE  180
YYIDERECQA CPDMKDAYVL CRITKRNDWI PGNGNELDNS DPHPEPYDAP PSVISTEQLN  240
LAAEPVVGVE AAPVTVAEPD GVTTSAITAN IPSPSDDINL DDWLNELFDP FFDPEQSLAS  300
ADLSPDEQNV ESSNVGALAP KVEQDYSSPN ENVVDDTEYL LPEDVYNILH PGTDDFNMLQ  360
NPLDQYPIQY ATDVWSGIQK EELWSPQANA EPSQSNEAAD NGIIRRYRSM KTPETSVPQF  420
KGKTQAKMRV GINKMATSSS ESINQTIKFE NSGRLVEHQK NQAHYVASTK RSDAGKPSTE  480
LSSNRGFLRG IRNAFAGCSD ARWNMILVAG FAIGVAVVAL HIGQRLGLSQ RDQQHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	2e-66	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G12610.2