PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G12610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 501aa MW: 55788.6 Da PI: 7.2033 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.1 | 4.9e-51 | 56 | 183 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGf FhP+d el+++yLkkk++g+k+e e+i+evdiyk+ePwdLp+ v +++++w+fF+ rd+ky++g+r+nrat +gyWk+tgkd+++ ONIVA01G12610.1 56 LPPGFGFHPKDTELISHYLKKKIHGQKIEY-EIIPEVDIYKHEPWDLPAkcDVPTKDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAI 148 79****************************.99***************5346667999************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g+kktLvf++gr p+g++t+W+mhey + ONIVA01G12610.1 149 KM-GKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYI 183 *9.99*****************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence |
MASMANQHPP QRRARASSGV PAARARGGRG CTGEPSRRAA LILPIWTMES LRDMVLPPGF 60 GFHPKDTELI SHYLKKKIHG QKIEYEIIPE VDIYKHEPWD LPAKCDVPTK DNKWHFFAAR 120 DRKYPNGSRS NRATVAGYWK STGKDRAIKM GKQTIGTKKT LVFHEGRPPT GRRTEWIMHE 180 YYIDERECQA CPDMKDAYVL CRITKRNDWI PGNGNELDNS DPHPEPYDAP PSVISTEQLN 240 LAAEPVVGVE AAPVTVAEPD GSLASADLSP DEQNVESSNV GALAPKVEQD YSSPNENVVD 300 DTEYLLPEDV YNILHPGTDD FNMLQNPLDQ YPIQYATDVW SGIQKEELWS PQANAEPSQS 360 NEAADNGIIR RYRSMKTPET SVPQFKGKTQ AKMRVGINKM ATSSSESINQ TIKFENSGRL 420 VEHQKNQAHY VASTKRSDAG KPSTELSSNR GFLRGIRNAF AGCSDARWNM ILVAGFAIGV 480 AVVALHIGQR LGLSQRDQQH T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 1e-66 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G12610.1 |