PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G08000.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 227aa    MW: 24475.3 Da    PI: 6.419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G08000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.6e-174694355
              AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  ONIVA01G08000.1 46 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDVAALSIKG 94
                     9****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAASEQSSES SSTASTSSCG KKQQVAGKRK REDVGGGGEQ AAAVSYRGVR MRAWGKWVSE  60
IREPRKKSRI WLGTFPCPEM AARAHDVAAL SIKGARAVLN FPDLAPALPR PASLAPRDVQ  120
AAAALAAVMH HHKHPSSSTS TSSPPAAPPP DEHHPRHEPQ QPESSREDDQ QQQPAAAAAA  180
QMAVAELVFD ELAPLWVEDV EFGTSDHCWT AYDALDPIGF QPLLWEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-31ERF family protein