PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G06360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 217aa MW: 22510 Da PI: 7.5561 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.3 | 8.9e-30 | 104 | 162 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K vk+s++pr+YYrC+ agC vkk+ver+ +dp++v++tY g Hnh ONIVA01G06360.1 104 LDDGFKWRKYGKKAVKSSPNPRNYYRCSAAGCGVKKRVERDGDDPRYVVTTYDGVHNHA 162 59********************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MAASLGLCHE TSYAYSYPAS NTSSSLCFPP LMADHIVDGG GGCSFGEFLE LGHSVYSLPL 60 PPPPSQPVVV AGGNNDQYGV SSSSAAAATT SRIGFRTRSE VEVLDDGFKW RKYGKKAVKS 120 SPNPRNYYRC SAAGCGVKKR VERDGDDPRY VVTTYDGVHN HATPGCVGGG GHLPYPTSAA 180 PAWSVPPAAA SPPPAHAQAW GAPLHAAAAA HSSESSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 4e-38 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G06360.1 |