PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G05270.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 442aa    MW: 49050.9 Da    PI: 7.8469
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G05270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.31.2e-15195244154
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                      s+y+GVr++  +g+W+AeIrd +     r  r ++g+f ++eeAa+a+ a  ++++
  ONIVA01G05270.1 195 SKYRGVRRRA-WGKWAAEIRDpV-----RkSRKWIGTFNSEEEAAAAYLAQSNQFH 244
                      89*****777.**********44.....55******************88766665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MSPSPSLVHI TRFASLLRSS SSFSLLRFAS KSPAISPPKT SPPPTTTINK PLLLLLFFLL  60
RLAISPPPPP HSLTSCHVIR AIDRVVASAA FAANGFFLLP SHPPPSKLVY EGRKNTAKSL  120
HDLQMMVPSS RKVRVFCSDP DATDSSDEDD QNKKERRFSR EILIPMENSK ASKPVKTLVQ  180
CGTKTVKDSE KEPTSKYRGV RRRAWGKWAA EIRDPVRKSR KWIGTFNSEE EAAAAYLAQS  240
NQFHEELMAL KIQSSVSEQE DLSSSVTISC VSSSQSCDQK IQAKPQEHKR VSVVVNRETV  300
EQKFKAQPQA QKIKAQPEVQ KRVSVKISHE TEDEHLLNLP STPKGKEISM GAVLGRIDEI  360
PVSNCVGHID EFPPDDFTRL ADAFPVSDFI GMADVPLGDD YIGLADISHL PLPITDLKFD  420
LNAELNWDGF DFASLEQELN CL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.15e-17ERF family protein