PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G04630.5
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 284aa    MW: 31814.6 Da    PI: 5.78
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G04630.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-1985134255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr++  +g+WvAeIr+p   + r +r +lg+f ta eAa a+++a+++++g
  ONIVA01G04630.5  85 AYRGVRQRT-WGKWVAEIREP---N-RgRRLWLGSFPTALEAAHAYDEAARAMYG 134
                      59****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MERGEGRRGD CSVQLCGIIE LPHWVRKKRT RRKSDGPDSI AETIKWWKEQ NQKLQEENSS  60
RKAPAKGSKK GCMAGKGGPE NSNCAYRGVR QRTWGKWVAE IREPNRGRRL WLGSFPTALE  120
AAHAYDEAAR AMYGPTARVN FADNSTDANS GCTSAPSLMM SNGPATIPSD EKDELESPPF  180
IVANGPAVLY QPDKKDVLER VVPEVQDVKT EGSNGLKRVC QERKTMEVCE SEGIVLHKEV  240
NISYDYFNVH EVVEMIIVEL SADQKTEVHE EYQEGDDGFS LFSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-35ERF family protein