PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G04630.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 274aa    MW: 30652.2 Da    PI: 5.8268
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G04630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.4e-1975124255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr++  +g+WvAeIr+p   + r +r +lg+f ta eAa a+++a+++++g
  ONIVA01G04630.1  75 AYRGVRQRT-WGKWVAEIREP---N-RgRRLWLGSFPTALEAAHAYDEAARAMYG 124
                      59****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MERGEGRRGD CSVQVRKKRT RRKSDGPDSI AETIKWWKEQ NQKLQEENSS RKAPAKGSKK  60
GCMAGKGGPE NSNCAYRGVR QRTWGKWVAE IREPNRGRRL WLGSFPTALE AAHAYDEAAR  120
AMYGPTARVN FADNSTDANS GCTSAPSLMM SNGPATIPSD EKDELESPPF IVANGPAVLY  180
QPDKKDVLER VVPEVQDVKT EGSNGLKRVC QERKTMEVCE SEGIVLHKEV NISYDYFNVH  240
EVVEMIIVEL SADQKTEVHE EYQEGDDGFS LFSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-35ERF family protein