PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM12G19700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 27863.5 Da PI: 6.6713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.7 | 1.8e-15 | 81 | 131 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +++G++++k +grW AeIrd + k r ++g+f+taeeAa a++a +++l+g OGLUM12G19700.1 81 RFHGIHRRK-SGRWSAEIRD----NmiKGSRSWVGTFDTAEEAAWAYDAVARRLYG 131 689***999.7*********....77455************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MCGENDDNGG AAGSSRRLPA VGAMRGPCGC EEKLKTTVVV VLSDDDDYEE EFRRYCENTT 60 LPAKGDKGGR RRPAASKKQH RFHGIHRRKS GRWSAEIRDN MIKGSRSWVG TFDTAEEAAW 120 AYDAVARRLY GPNARTNFPL PPPPPPPPVV VPLLPAPAVA NKKMNSKRKK PVVAAEMVAP 180 AGGEPAAAAG EMAPVLLGNA LEATNGWEFE PYSSMGLVVG GAVYNYADEP ETADELQLLH 240 LMHGGAMVDF AADGCLWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 2e-10 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM12G19700.1 |