PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM12G07910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Nin-like | ||||||||
Protein Properties | Length: 450aa MW: 47685.5 Da PI: 6.0477 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 74.9 | 9.8e-24 | 364 | 414 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k+++l ++ yF+lpi++AAk+L++c+T+LK iCR++G+ RWP+Rk++s+ OGLUM12G07910.1 364 TKQLQLGGIAPYFELPIAKAAKKLDICATALKGICRKHGVLRWPYRKVRSI 414 799*********************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MAGDGGNGAA DGGGEHLELD FFPSPLLDNF DVLELLDLSV LGDVDDDGAP PAPAPVQLSV 60 DGAGGGRINK PGSSVDDLVD WSTAFGNNCS KIDGEYGGAS TSSFAAPAPA PPQEDYCSGC 120 QVLREVVHSN GLEITKLCIH GGVASGEFYH AILDVYRVSA SAPAPALAHH SIIKGRGYDW 180 VKQYLTEYAL RRAGGGFAVV QDSLSAFHDA LCTTMAPCSS HVGDDDAHRR ASSSAAAAAE 240 ERTNGNGDHG QLVVHNAAVL PMLESSRCLV AADQAATTNN NGSGDRRLVV LDTTAIQPPA 300 SGCILHMAFP SKSYQSSRPT TLPSRYQECT CNPVAYEMDG VRSSLAPICW PELLGYNVTN 360 REKTKQLQLG GIAPYFELPI AKAAKKLDIC ATALKGICRK HGVLRWPYRK VRSIDRQIAT 420 LRRSGNGDAT RNEIETLIAS RRRIVAGLDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 1e-12 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM12G07910.1 |