PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM12G04370.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 650aa MW: 66493.5 Da PI: 6.2339

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM12G04370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	369	406	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + OGLUM12G04370.1 369 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 406 554459******************************88 PP
2	BELL	115.1	3.5e-37	218	289	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kk+kLl++l+eV++rY+qy+ q+q v+++Fea+ag gsa+ YtslAl++iSr+FrcL+daia q+ OGLUM12G04370.1 218 ERQELQMKKSKLLNMLDEVEQRYRQYHRQMQGVAAAFEAAAGAGSATTYTSLALRTISRQFRCLRDAIAAQV 289 79*******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MAAYFTGGGA GTDVVQAAGT DGLQTLYLMN PSYVGFTDAA AAPGGGAAAA NMVFLNSAVS 60 TLTPASFGHH HQPTPAAQHF VGIPLQSGYN LWGPDATGGN DVSPPRHGAQ QQAPAAAGTS 120 AAAVSPVLSL SSREAAPPVT VAAAAVPGGT DQEKVVMRSR YLKAAQELLD EAVSVSKGAA 180 TAVKKKEDSE GGVSGGGGGA EDGGGSKSGA AAEMSTAERQ ELQMKKSKLL NMLDEVEQRY 240 RQYHRQMQGV AAAFEAAAGA GSATTYTSLA LRTISRQFRC LRDAIAAQVR AASRGLGEDC 300 GDDEGGGGGG RTTVGSRLRF IDHQLRQQRA MQQLGMVHAA AAGGAAGGGW RPQRGLPERA 360 VSVLRAWLFE HFLHPYPKDS DKVMLAKQTG LTRSQVSNWF INARVRLWKP MVEEMYAEET 420 KAKEEEEEEH DAAAAAAGDR GGVVEQAPSK PDDSAGIGMS SSSPAAAASR SVGVHAGDQH 480 AQASFYGGGG GGDDPFQCRI KKARTTTADE PAAAAAFHVS GEAAVSHREL LMKFTEAGGE 540 GVRTGHPHVN DDDDDVPGGA GGYSLFTAAQ YGHQFGSDHF AFAGHGGGGG GGVSLTLGLP 600 HGADQTPASF LMGAGAGSDG GGAPVTTAGY DMNMQSTKSL AAQLMRDFVA

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MAAYFTGGGA GTDVVQAAGT DGLQTLYLMN PSYVGFTDAA AAPGGGAAAA NMVFLNSAVS  60
TLTPASFGHH HQPTPAAQHF VGIPLQSGYN LWGPDATGGN DVSPPRHGAQ QQAPAAAGTS  120
AAAVSPVLSL SSREAAPPVT VAAAAVPGGT DQEKVVMRSR YLKAAQELLD EAVSVSKGAA  180
TAVKKKEDSE GGVSGGGGGA EDGGGSKSGA AAEMSTAERQ ELQMKKSKLL NMLDEVEQRY  240
RQYHRQMQGV AAAFEAAAGA GSATTYTSLA LRTISRQFRC LRDAIAAQVR AASRGLGEDC  300
GDDEGGGGGG RTTVGSRLRF IDHQLRQQRA MQQLGMVHAA AAGGAAGGGW RPQRGLPERA  360
VSVLRAWLFE HFLHPYPKDS DKVMLAKQTG LTRSQVSNWF INARVRLWKP MVEEMYAEET  420
KAKEEEEEEH DAAAAAAGDR GGVVEQAPSK PDDSAGIGMS SSSPAAAASR SVGVHAGDQH  480
AQASFYGGGG GGDDPFQCRI KKARTTTADE PAAAAAFHVS GEAAVSHREL LMKFTEAGGE  540
GVRTGHPHVN DDDDDVPGGA GGYSLFTAAQ YGHQFGSDHF AFAGHGGGGG GGVSLTLGLP  600
HGADQTPASF LMGAGAGSDG GGAPVTTAGY DMNMQSTKSL AAQLMRDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-80	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM12G04370.1