PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM12G01350.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 153aa MW: 17295.2 Da PI: 10.2962

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM12G01350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	24.3	6.4e-08	105	126	2	23
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 dDg++WrKYG K+ +s+fp s OGLUM12G01350.1 105 DDGHQWRKYGEKKLSNSNFPSS 126 8******************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MRGRRVLTLK NGRLPSLFNG AINKSGQRRA PIPTPSSSSP SSLPSETTRP PQNLPFFSET 60 EMALDSVPSY PSDLGSSRAR TPQQQRVSPR KEERTWTTDT YAPYDDGHQW RKYGEKKLSN 120 SNFPSSGRTA PTHQYLPEWK CIVVYYNPNH VDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	5e-07	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM12G01350.1