PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM11G08660.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Nin-like | ||||||||
Protein Properties | Length: 901aa MW: 99502.5 Da PI: 5.6001 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 92.6 | 2.8e-29 | 547 | 597 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ OGLUM11G08660.3 547 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 597 799**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 901 aa Download sequence |
MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV 60 STAVGSSSRQ DDADVSITEE GTTRTRSDRA AGLASGEPVA VGIGSVPKPF DGVTLTERML 120 RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE 180 GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYATR HEVRGSLAMP VFNSSGGSCC 240 AVLEVVMTRE KDNFCLEMVN VSNALQGNLD QFAYLDQLEV LSYSRDQKLA LMEIFDVLQA 300 VCQAHLLPLA LAWIPVCSKR DVLVSIEYGA KFGKRNKEVL CIEESACYVN DTRVRDFVQV 360 CAEHPLEKGQ GVAGNAYLSN NPFFSSDVKD YDMHAYPLVN HARKFGLHAA VAIRLRSTYT 420 KNDDYVLEFF LPVLCKGGEE QQLLLDSISA TMRKVCKSLR TVSDAELKED VTRKPSNENR 480 SGTRCPSPVN LIYSGREIDV SNETKTNTPL EYQIEGIDEQ LSDTKSTNKL IKCSNASDGE 540 KRRSSTEKSV SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQHGISRWP SRKIKKVNRS 600 LKKIQNVISS VHGVEGVLKY DPSTGCLISS VSPSIEPVLM NVEHKGSDPL PIESELPHLN 660 FEPDCDAYRR EHAGQDVLHK LQNKQNGEIN FDMDDGELFR NSHSTRTLSG AFCEDMSNGL 720 YVAREMTCVA KTGTRTERLE HKPSSRDSFS APQEYRMESE TDKSNKNSKQ SLPSSSSMTD 780 CSTSSGETFK SIKSQSANES NTTVVVKASY KNDTIRFKLL PSMKYEQLLE EIAKRLKLSV 840 GVFQIKYKDD EGDWVILASD ADLQECLEIL DTTRLHILKL QVQDVVCPIG SSSGSCSMLR 900 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43500.1 | 0.0 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM11G08660.3 |