PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM11G07800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 21606.2 Da PI: 4.508 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3e-18 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eIr+p gk++r++lg+f ++e+Aa a++ a+++l+g OGLUM11G07800.1 20 QYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESPEMAAVAHDVAALRLRG 69 69****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MEVVVMQNGG GGGGGEMAGQ YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ESPEMAAVAH 60 DVAALRLRGR DARLNFPAIA HRFRRPDTAE PGDVRAAALE AAAQVRFTPD LLVVAGGDDA 120 GRRCCSAGEA EAEAVAAAAW EWDVVVGGGG DELEAKSPNM WAELAEAMLM APPVWEGGGE 180 TDNDEWAQQA ASLWDPSVWD Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 2e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM11G07800.1 |