PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM11G03790.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Trihelix | ||||||||
Protein Properties | Length: 520aa MW: 58521.7 Da PI: 6.4747 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 84.9 | 1e-26 | 192 | 288 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++e+ +++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ +++++++++++d OGLUM11G03790.2 192 KWTDSMVKLLITAVSYTGEDPGADLgggrrnysmmQKKGKWKAISKVMGERGCHVSPQQCEDKFNDLNKRYKRLTDILGRGtACNVVENHSLLD 285 7*********************8744455667777**********************************************55*********** PP trihelix 84 qle 86 +++ OGLUM11G03790.2 286 HMN 288 996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 520 aa Download sequence |
MWAPWSVGPA CQRETSCSAR PNISAEKEAE AEADCLLAGV QFSRRIPSLY SCASSCTPVS 60 ILYVTNKKLK CLGDRFGEME GSNPPGNMTQ GPSYGSLDLH GISKQMHPPN SGNQGFNQPQ 120 IPGNFTIPMD RVTEPDNISD GVQLGQHGKI AHHHHHHIHH SKNHGSDEEE HDMNEDAADG 180 KDKKGSPWHR MKWTDSMVKL LITAVSYTGE DPGADLGGGR RNYSMMQKKG KWKAISKVMG 240 ERGCHVSPQQ CEDKFNDLNK RYKRLTDILG RGTACNVVEN HSLLDHMNIS EKMKEDARKI 300 LNSKHLFYEE MCSYHNNNRI SLPEDPALQQ SLQLALRCKE DNDFMRHASG DAELDDDQSE 360 DSDYEENEEE HRAVDTNIRG PSMHKRMWHV VDHGDVGFVT SCSNDGSGRS DPYDVLDINK 420 PFPDGSDLAL VQKDLALKAA EIQKHRLQIE TKAVQLAKQR LKWEMFRKNK DLELEKLALE 480 NEQMMLQNKR EFTLKLGELF LTMNAEVKSK CGGLASQMAM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 3e-86 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM11G03790.2 |