PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM11G03520.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 682aa MW: 70300.1 Da PI: 6.5765

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM11G03520.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	384	421	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + OGLUM11G03520.1 384 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 421 664459******************************88 PP
2	BELL	118.3	3.6e-38	245	316	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kk kL+++l+eV++rY+qy++q+q+v++sFeavag gsa+ Yt+lAl++iSr+FrcL+daia+q+ OGLUM11G03520.1 245 ERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTISRQFRCLRDAIAGQV 316 79*******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MAAYYHGGAG TDIQSGTDGL QTLYLMNPSY AGYGDAAAAA AAPGAAANMM LLNSAVTSMT 60 PVSFGHQPSP SPSSSSAAQH FVGIPLQAPP ASGYNLWTPA AATGAGDMSP PTPQHQHQQA 120 HGGGAAGVSA VLSLSSREAA PPVTVAAVVA AGDEGRYLQA VAQGAASQGQ MVMSSKYLKA 180 AQELLDEVVS VSKGVDDVKA AAAAKSPASV KKKEDSEGVS GGGTEDGGGA KSGGAPPPPE 240 MSTAERQELQ MKKGKLINML DEVEQRYRQY HQQMQVVVAS FEAVAGGGSA RTYTALALRT 300 ISRQFRCLRD AIAGQVRAAS RALGEAVDAD GGCGRTVGSR LRYIDHQLRQ QRALQQLGMM 360 QSNAWRPQRG LPERSVSILR AWLFEHFLHP YPKDSDKIML AKQTGLTRSQ VSNWFINARV 420 RLWKPMVEEM YLEETKDQDG GGGGAGDEGS KPGGSKGGGA GVNGGVVDSA AKMDSKAAHM 480 ESGGGVHPSL LELAGDHQAQ AGFYDDDDEE DGGAAAALQQ KLKKARTEEQ QQAAFHVSDV 540 ATLHAHAAAA AAARHDEVSH RELLMKFMES GSAGAGAAAR DHHHEHHGGV GYSLFAPAPY 600 GQFATEQFAF AGHGGGGGGG GVSLTLGLPH GAEQTASFLM TSSNGSDGAG HVAAGGGGGG 660 GYDMNMQSTK SFAAQLMRDF VA

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MAAYYHGGAG TDIQSGTDGL QTLYLMNPSY AGYGDAAAAA AAPGAAANMM LLNSAVTSMT  60
PVSFGHQPSP SPSSSSAAQH FVGIPLQAPP ASGYNLWTPA AATGAGDMSP PTPQHQHQQA  120
HGGGAAGVSA VLSLSSREAA PPVTVAAVVA AGDEGRYLQA VAQGAASQGQ MVMSSKYLKA  180
AQELLDEVVS VSKGVDDVKA AAAAKSPASV KKKEDSEGVS GGGTEDGGGA KSGGAPPPPE  240
MSTAERQELQ MKKGKLINML DEVEQRYRQY HQQMQVVVAS FEAVAGGGSA RTYTALALRT  300
ISRQFRCLRD AIAGQVRAAS RALGEAVDAD GGCGRTVGSR LRYIDHQLRQ QRALQQLGMM  360
QSNAWRPQRG LPERSVSILR AWLFEHFLHP YPKDSDKIML AKQTGLTRSQ VSNWFINARV  420
RLWKPMVEEM YLEETKDQDG GGGGAGDEGS KPGGSKGGGA GVNGGVVDSA AKMDSKAAHM  480
ESGGGVHPSL LELAGDHQAQ AGFYDDDDEE DGGAAAALQQ KLKKARTEEQ QQAAFHVSDV  540
ATLHAHAAAA AAARHDEVSH RELLMKFMES GSAGAGAAAR DHHHEHHGGV GYSLFAPAPY  600
GQFATEQFAF AGHGGGGGGG GVSLTLGLPH GAEQTASFLM TSSNGSDGAG HVAAGGGGGG  660
GYDMNMQSTK SFAAQLMRDF VA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	3e-90	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM11G03520.1