PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM11G02060.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 531aa MW: 57689.5 Da PI: 6.566

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM11G02060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	69.8	7.2e-22	339	464	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + GfrF+P+ e+l+++yL + ++gk+++ +e i ++d+y +eP+dL k + e+ fF++ ++++ +++rk+r++ +g+W + + OGLUM11G02060.1 339 TLGFRFNPSAEDLITFYLPRLIAGKPTKDTEKfICRADVYGSEPSDLAgKfapvpR--CEKGGRLFFTSCKRHKGSSTRKERTAGDGTWVRQNS 430 67**********************6654544**********843454222..2445779999999999************8866 PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 k v++k g +vg + + f ++g+ tdW+m+e + OGLUM11G02060.1 431 -KGVKNKAGVKVGETQNFRFK----KDGSYTDWLMEEHH 464 .889999*********7....78999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MATLPQMAAT KERQEAANPT TTTRTLVESV TNWIRVYSDG SVDRLGPPEA ATFMVLVPPY 60 DDPRDGVTVH DVATDHGVDV RLYLTTTAPA RRRPVLVHFH GGGFCLSHAA WSLYHRFYAR 120 LAVDLDVAGI VSVVLPLAPE HRLPAAIDAG HAALLWLRDV ASGGSDTIAH PAVERLCGAA 180 DFSRVFLIGD SAGGVLVHNV AARASEAGAE ALDPIRLAGG VQLHPGFILP EKSPSELENP 240 PTPFMTQETV DKFVVLALPG AQLPPMLVMV AEEDMLRDAQ TEYGEAMARA GKAVETVVSR 300 GRGIGHVFYL NWFAVESDPV AAARARELVD AQYVEKMLTL GFRFNPSAED LITFYLPRLI 360 AGKPTKDTEK FICRADVYGS EPSDLAGKFA PVPRCEKGGR LFFTSCKRHK GSSTRKERTA 420 GDGTWVRQNS KGVKNKAGVK VGETQNFRFK KDGSYTDWLM EEHHCCRQQA VAGDEEPVIC 480 RMYVSPRAPP DSAARQESAA FVQQQPAPQV SDPPCDKKKR DDVAEEAPAA A

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MATLPQMAAT KERQEAANPT TTTRTLVESV TNWIRVYSDG SVDRLGPPEA ATFMVLVPPY  60
DDPRDGVTVH DVATDHGVDV RLYLTTTAPA RRRPVLVHFH GGGFCLSHAA WSLYHRFYAR  120
LAVDLDVAGI VSVVLPLAPE HRLPAAIDAG HAALLWLRDV ASGGSDTIAH PAVERLCGAA  180
DFSRVFLIGD SAGGVLVHNV AARASEAGAE ALDPIRLAGG VQLHPGFILP EKSPSELENP  240
PTPFMTQETV DKFVVLALPG AQLPPMLVMV AEEDMLRDAQ TEYGEAMARA GKAVETVVSR  300
GRGIGHVFYL NWFAVESDPV AAARARELVD AQYVEKMLTL GFRFNPSAED LITFYLPRLI  360
AGKPTKDTEK FICRADVYGS EPSDLAGKFA PVPRCEKGGR LFFTSCKRHK GSSTRKERTA  420
GDGTWVRQNS KGVKNKAGVK VGETQNFRFK KDGSYTDWLM EEHHCCRQQA VAGDEEPVIC  480
RMYVSPRAPP DSAARQESAA FVQQQPAPQV SDPPCDKKKR DDVAEEAPAA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM11G02060.1