PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM11G01330.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 352aa MW: 39584.2 Da PI: 7.1575

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM11G01330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.5	4.7e-48	14	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtd e++ +yL +k + +++ i+evd++k+ePwdLp +++ +++ewy Fs++d ky+tg r+nratk+gyWkatgkd+e+++ OGLUM11G01330.1 14 LPPGFRFHPTDAEVILNYLLEKFINPSFTS-LPIHEVDLNKCEPWDLP-TARMGNNEWY-FSRKDMKYPTGMRTNRATKEGYWKATGKDREIFK 104 79********************999888.56***********.4455777885.7999************************** PP NAM 95 k.........kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfy grapkg++t+Wvmhe+rl OGLUM11G01330.1 105 PaiyegssknNKQLVGMKKTLVFYMGRAPKGTRTNWVMHEFRL 147 99999999887888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MVEPVKSELG SLFLPPGFRF HPTDAEVILN YLLEKFINPS FTSLPIHEVD LNKCEPWDLP 60 TARMGNNEWY FSRKDMKYPT GMRTNRATKE GYWKATGKDR EIFKPAIYEG SSKNNKQLVG 120 MKKTLVFYMG RAPKGTRTNW VMHEFRLHAN LHNHYPNLRL NPNEWVVCKV FHKKQGDEAI 180 NNQQQQPAVD QADDDDIFQL DDIFAYPSIY DFSNSSANIL SAPPNNNAVH SSVSAGTTMT 240 STTTASSFQH QPNCYSAPLQ QHVSSWNNTP GAGGAHGIGS SYYNLQQQQQ QQAAMVKDLE 300 DIIAVPDYGT LLPSSNKGSS IRSAMAGVSQ QNPLGVPQYK IENYGDHYIS RE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MVEPVKSELG SLFLPPGFRF HPTDAEVILN YLLEKFINPS FTSLPIHEVD LNKCEPWDLP  60
TARMGNNEWY FSRKDMKYPT GMRTNRATKE GYWKATGKDR EIFKPAIYEG SSKNNKQLVG  120
MKKTLVFYMG RAPKGTRTNW VMHEFRLHAN LHNHYPNLRL NPNEWVVCKV FHKKQGDEAI  180
NNQQQQPAVD QADDDDIFQL DDIFAYPSIY DFSNSSANIL SAPPNNNAVH SSVSAGTTMT  240
STTTASSFQH QPNCYSAPLQ QHVSSWNNTP GAGGAHGIGS SYYNLQQQQQ QQAAMVKDLE  300
DIIAVPDYGT LLPSSNKGSS IRSAMAGVSQ QNPLGVPQYK IENYGDHYIS RE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	2e-64	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM11G01330.1